methods of producing a soybean plant with seeds with an oleic acid content between about 65% and abo

专利摘要:
METHODS OF PRODUCTION OF A SOYBEAN PLANT WITH SEEDS WITH AN OILIC ACID CONTENT BETWEEN ABOUT 65% AND ABOUT 85% AND FOR MANUFACTURING SOYA OIL WITH AN OLEIC ACID CONTENT OF AT LEAST 65% The present invention relates to a soybean plant with mutations in FAD2-1A and FAD2-1B. In addition, the present invention is directed to the seeds of said plants with altered proportions of monounsaturated and polyunsaturated fats. In particular, the present invention is directed to plants where the plants exhibit high levels of oleic acid.
公开号:BR112013017972B1
申请号:R112013017972-4
申请日:2012-01-17
公开日:2021-02-17
发明作者:Kistin D. Bilvyeu；James Grover Shannon；Tung Anh Pham；Jeong-Dong Lee
申请人:The Curators Of The University Of Missouri；The United States Of America, As Represented By The Secretary Of Agriculture；
IPC主号:

专利说明:

[0001] [001] This application claims priority benefit from United States Provisional Application Serial No. 61 / 433,120, filed on January 14, 2011. GOVERNMENT RIGHTS STATEMENT
[0002] [002] This invention was made with government funding under Grant Number 58-6645-8-121, provided by the United States Department of Agriculture, Agricultural Research Service (USDA / ARS). The United States government has certain rights in the invention. SEQUENCE LISTING
[0003] [003] The present application is accompanied by a sequence listing on paper and in a computer-readable form that accurately reproduces the sequences described here. BACKGROUND
[0004] [004] The present invention relates to vegetable oils that are used in a variety of applications. New vegetable oil compositions and improved approaches are needed to obtain oily compositions from natural or biosynthetic plant sources. Depending on the intended use of the oil, several different fatty acid compositions are desired. Plants, especially species which synthesize large amounts of oil in seeds, are an important source of oils for industrial and food uses.
[0005] [005] Oleic acid is a monounsaturated omega-9 fatty acid found in various plant and animal sources. It is considered one of the healthiest sources of fat in the diet and is commonly used as a substitute for fat sources that are rich in saturated fats.
[0006] [006] Diets in which fat consumption is rich in oleic acid have been shown to reduce total cholesterol, arteriosclerosis and cardiovascular disease levels. Specifically, oleic acid has been shown to increase levels of high-density lipoproteins (High-Density Lipoproteins - HDLs), known as "good cholesterol", while reducing low-density lipoproteins (LDLs) ), also known as "bad cholesterol". Thus, the development of new and inexpensive food sources that comprise healthy forms of fatty acid is desirable.
[0007] [007] Plants synthesize fatty acids through a common metabolic pathway known as the fatty acid synthase pathway (Fatty Acid Synthetase - FAS). Beta-ketoacil-ACP synthases (Acyl Carrier Protein - portion of Acila Carrier Protein) are important rate-limiting enzymes in the FAS of plant cells and exist in several versions. Beta-ketoacyl-ACP I synthase catalyzes chain elongation in palmitoyl-ACP (C16: 0), while beta-ketoacyl-ACP II synthase catalyzes chain elongation in stearoyl-ACP (C18: 0). Beta-ketoacyl-ACP IV synthase is a variant of beta-ketoacyl-ACP II synthase and can also catalyze 18: 0-ACP chain elongation. In soy, the main FAS products are 16: 0-ACP and 18: 0-ACP. Desaturation of 18: 0-ACP to form 18: 1-ACP is catalyzed by a soluble delta-9 desaturase located in plastid (also referred to as "stearoyl-ACP desaturase").
[0008] [008] FAS and delta-9 plastidial desaturase products, 16: 0-ACP, 18: 0-ACP and 18: 1-ACP, are hydrolyzed by specific thioesterases (FAT). Plant thioesterases can be classified into two gene families based on sequence homology and substrate preference. The first family, FATA, includes long-chain acyl-ACP thioesterases having activity primarily over 18: 1-ACP. Enzymes of the second family, FATB, commonly use 16: 0-ACP (palmi-toil-ACP), 18: 0-ACP (estearoil-ACP) and 18: 1-ACP (oleoil-ACP). Such thioesterases have an important role in determining the chain length during de novo fatty acid biosynthesis in plants and, thus, these enzymes are useful in providing various modifications of acyl grease compositions, particularly in relation to the relative proportions of the different acyl groups. grease that are present in seed storage oils.
[0009] [009] The products of the FATA and FATB reactions, the free fatty acids, leave the plastids and are converted into their respective esters of acyl-CoA. Acil-CoAs are substrates for the lipid biosynthesis pathway (Kennedy pathway), which is located in the endoplasmic reticulum (Endoplasmic Reticulum - ER). This pathway is responsible for the formation of the lipid membrane, as well as the biosynthesis of triacylglycerols, which constitute the seed oil. In the ER, there are additional membrane-bound desaturases, which can still desaturate 18: 1 in polyunsaturated fatty acids.
[0010] [0010] The soybean genome has two seed-specific isoforms of a delta-12 desaturase, FAD2, designated FAD2-1A and FAD2-1B, which differ only in terms of 24 amino acid residues. The genes encoding FAD2-1A and FAD2-1B are designated Glyma10g42470 in Link Group O and Glyma20g24530 in Link Group I in the soybean genome sequence, respectively (Gly-ma1.0, Soybean Genome Project, DoE Joint Genome Institute) . FAD2-1A and FAD2-1B are found in the ER, where they can additionally desaturate oleic acid into polyunsaturated fatty acids. Delta-12 desaturase catalyzes the insertion of a double bond in oleic acid (18: 1), forming linoleic acid (18: 2), which results in a consequent reduction in oleic acid levels. A delta-15 desaturase (FAD3) catalyzes the insertion of a double bond in linoleic acid (18: 2), forming linoleic acid (18: 3). Table 1. Characteristics of the main fatty acids
[0011] [0011] The designations (18: 2), (18: 1), (18: 3), etc. refer to the number of carbon atoms in the fatty acid chain and the number of double bonds in it; Table 1. As used here, the designations sometimes take the place of the corresponding common name for fatty acid. For example, oleic acid (18: 1) contains 18 carbon atoms and a double bond and is sometimes referred to simply as "18: 1".
[0012] [0012] Although previous research has demonstrated the important role of the FAD2-1A gene in increasing oleic acid, no report has demonstrated a direct effect of the FAD2-1B gene on the accumulation of oleic acid. Soy is a profitable crop that provides a major component of oils and fats in the American diet. Soy is considered an oilseed and typically contains about 20% oleic acid as part of the fatty acid profile in the seed oil.
[0013] [0013] Soy oil is used by the food industry in a variety of food products, including cooking oils, salads, sauces, margarine, bread, mayonnaise, non-dairy coffee creams and snacks. Soy oil is also used in industrial markets, such as the biodiesel and biolubricant markets.
[0014] [0014] For many oil applications, low levels of saturated fatty acids are desirable. Saturated fatty acids have high melting points, which is undesirable in many applications. When used as a raw material or fuel, saturated fatty acids cause turbidity at low temperatures and give poor cold flow properties, such as spill points and cold filter clog points, to the fuel. Oil products containing low levels of saturated fatty acids may be preferred by consumers and the food industry, because they are perceived as healthier and / or can be labeled as "low in saturated fat" according to FDA guidelines . In addition, low saturation oils reduce or eliminate the need to synthesize the oil for food applications, such as salad oils. In biodiesel and lubricant applications, oils with low levels of saturated fatty acids provide enhanced cold flow properties and do not cloud at low temperatures.
[0015] [0015] Various technologies are known for generating medium to high levels of oleic acid in soybean plants. For example, North American Patent Publication No. 2007/0214516 describes a method for obtaining soybean plants that have moderately high levels of oleic acid. However, this technology requires the genetic modification of soybean plants through the introduction of a transgene through transgenesis.
[0016] [0016] Although transgenic soybean strains have been generated that produce soybean oil containing medium to high levels of oleic acid, non-genetically modified (non-GMO) soybean plant lines that produce seeds with medium to high oleic acid content are desirable. SUMMARY
[0017] [0017] The results presently described overcome the problems described above and represent an advance in the technique by providing a method for creating and selecting conventional non-genetically modified soybean strains containing more than about 20% and up to about 85% oleic acid in the soybean oil with an increase of up to four times more than the levels produced by commercial soybeans. The results described here demonstrate the ability to efficiently incorporate a trace of increased oil quality into elite varieties of soy plants without expensive testing and evaluation used in traditional soybean breeding.
[0018] [0018] The results currently described demonstrate that the mutation in the FAD2-1B gene only resulted in much smaller increases in oleic acid levels. However, combinations of mutations in the FAD2-1A and FAD2-1B genes resulted in significant increases in the level of oleic acid in the seed oil.
[0019] [0019] In one embodiment, a soybean plant that has one or more mutations in the FAD2-1A and FAD2-1B genes, in which seeds of that plant have an oleic acid content of about 75% to about 85%.
[0020] [0020] In one embodiment, a soybean plant that expresses a mutated FAD2-1B gene encoded by a polynucleotide having at least 70%, 80%, 90%, 95%, 98% or 99% identity with the SEQ sequence ID NO: 1 or SEQ ID NO: 3 and expressing a mutated FAD2-1A gene encoded by a polynucleotide having at least 70%, 80%, 90%, 95%, 98% or 99% identity with the SEQ sequence ID NO: 7 or expressing mutant M23 characterized by the deletion of a FAD2-1A gene having a sequence as shown in SEQ ID NO: 5 has seeds with a modified fatty acid composition that is about 75% to about 85% acid oleic.
[0021] [0021] In one embodiment, a method of selecting soybean plants with seeds having an oleic acid content of between about 65% to about 85% is described, said method comprising: crossing a first soybean plant that has one or more mutations in a first polynucleotide sequence that encodes a FAD2-1A comprising an amino acid sequence as shown in SEQ ID NO: 10 with a second soybean plant that has one or more mutations in a second polynucleotide sequence that encodes FAD2-1B comprising an amino acid sequence as shown in SEQ ID NO: 12.
[0022] [0022] In one embodiment, a nucleic acid encoding a mutant form of FAD2-1B is described comprising: a sequence length of at least 72 nucleotides (24 amino acids) encoding SEQ ID NO: 12 or a fragment thereof, in that the sequence includes at least one mutation selected from the group consisting of: a. a non-conservative amino acid substitution at the position of amino acid 137; and b. a non-conservative amino acid substitution at the position of amino acid 143.
[0023] [0023] In one embodiment, a soybean plant that expresses a mutant FAD2-1B gene encoded by a polynucleotide having at least 70%, 80%, 90%, 95%, 98% or 99% identity with the SEQ sequence ID NO: 1 or SEQ ID NO: 3 has seeds with a modified fatty acid composition that is about 22% to about 41% oleic acid.
[0024] [0024] In one embodiment, a soybean plant that expresses a mutant FAD2-1B gene that results in reduced FAD2-1B activity has seeds with a modified fatty acid composition of oleic acid levels greater than about 20% .
[0025] [0025] In one embodiment, a transgenic soybean plant expressing a dominant negative form of FAD2-1B has seeds with a modified fatty acid composition of oleic acid levels greater than 20%, preferably between about 20% to 60% and, more preferably, between about 60% to 85%.
[0026] [0026] In one aspect, the non-functional mutant FAD2-1A and 1B FAD2 alleles can be identified by screening naturally occurring soy plants that have a high oleic acid content. Plants with these mutations can be crossed and subjected to conventional growth-enhancing techniques to preserve the trace of high oleic acid content while, at the same time, also selecting others of such characteristics, such as high yield, healthy root structure and others desired phenotypes, in order to provide a variety that stably reproduces these traits among a large population of plants. BRIEF DESCRIPTION OF THE DRAWINGS
[0027] [0027] Figures 1A and 1B are results of a weblogo showing the conservation of amino acids from fatty acid desaturase enzymes.
[0028] [0028] FIG. 2 is a bar graph that illustrates the relative levels of fatty acids as a function of the total fatty acids in the offspring of recombinant strains M23 x PI 283327.
[0029] [0029] FIG. 3 is a bar graph that illustrates the oleic acid content as a function of the total fatty acids of parents and offspring of recombinant endogenous strains M23 x PI 283327.
[0030] [0030] FIG. 4 is a bar graph that illustrates the oleic acid content as a function of the total fatty acids in the offspring of F2 seeds of recombinant strains 17D x PI 283327.
[0031] [0031] FIG. 5 is a bar graph that illustrates oleic acid levels as a function of the total fatty acids in the offspring of recombinant strains M23 x PI 567189A.
[0032] [0032] FIG. 6 is a bar graph that illustrates the levels of oleic acid as a function of the total fatty acids in the offspring of recombinant strains Jake x PI 283327.
[0033] [0033] FIG. 7 is a graphical representation of a melting curve analysis used to determine the genotype of several FAD2 alleles.
[0034] [0034] FIG. 8 is a bar graph that illustrates oleic acid levels as a function of total fatty acids for the population 1.
[0035] [0035] FIG. 9 is a bar graph that illustrates oleic acid levels as a function of total fatty acids for the population 2.
[0036] [0036] FIG. 10 is a bar graph that illustrates oleic acid levels as a function of total fatty acids for the population 3. DETAILED DESCRIPTION
[0037] [0037] As used here, "allele" refers to any one or more alternative forms of a gene locus, all alleles which refer to a trait or characteristic. In a diploid cell or organism, the two alleles of a given gene occupy corresponding loci on a pair of homologous chromosomes.
[0038] [0038] As used here, "FAD2" refers to an encoded gene or protein capable of catalyzing the insertion of a double bond in an acyl grease moiety in the twelfth position from the terminated carboxy. FAD2 proteins are also referred to as "delta-12 desaturase" or "omega-6-desaturase". The term "FAD2-1A" is used to refer to a FAD2 gene or protein defined as Glyma10g42470.1 in the entire genomic sequence Glyma1.0 (http://www.phytozome.net/soybean) which is naturally expressed in a manner specific in seed tissue and the term "FAD2-1B" is used to refer to a FAD2 gene or protein defined as Glyma20g24530.1 in the entire genomic sequence Glymal.0 (http://www.phytozome.net/ soybean) which is (a) a different gene from the FAD2-1A gene or protein and (b) is naturally expressed in various tissues, including the seed.
[0039] [0039] As used herein, "gene" refers to a nucleic acid sequence comprising a 5 'promoter region associated with gene product expression, any introns and exons regions and 3' or 5 'untranslated regions associated with expression of the gene product.
[0040] [0040] As used here, "genotype" refers to the genetic makeup of a cell or organism.
[0041] [0041] As used here, "mutant" means changed compared to a reference. Mutant can apply to different alleles of a single gene that are distinguished by different nucleotide sequences or different plant strains where the mutant strain has at least one characteristic that is different from the reference strain. Mutants can arise, for example, through naturally occurring or transgenic processes. Mutations can arise by insertion, deletion or truncation. Non-functional mutants are those where the mutation prevents expression of the gene or results in the expression of a protein that is totally or partially non-functional.
[0042] [0042] As used here, "phenotype" refers to the detectable characteristics of a cell or organism, characteristics which are the manifestation of gene expression.
[0043] [0043] As used here, non-genetically modified (non-GMO) means reasonably capable of occurring in nature. An organism is considered non-GMO if it has not been genetically modified by adding exogenous or recombinant nucleic acid, such as a transgene, to alter the organism's genetic makeup.
[0044] [0044] As used here, "passage" refers to the crossing of two parental plants.
[0045] [0045] As used here, "F1" refers to the first generation offspring of the cross between two plants.
[0046] [0046] As used here, "F2" refers to the second generation offspring of the cross between two plants.
[0047] [0047] As used here, "F3" refers to the third generation offspring of the cross between two plants.
[0048] [0048] As used here, "F4" refers to the fourth generation offspring of the cross between two plants.
[0049] [0049] As used here, "F5" refers to the fifth generation offspring of the cross between two plants.
[0050] [0050] As used here, "F6" refers to the sixth generation offspring of the cross between two plants.
[0051] [0051] As used here, "F7" refers to the seventh generation offspring of the cross between two plants.
[0052] [0052] As used here, "F8" refers to the eighth generation offspring of the cross between two plants.
[0053] [0053] As used here, a recombinant endogenous lineage (Recombinant Inbred Line - RIL) is produced to form a permanent and stable quantitative trait locus (QTL) mapping feature. In the first stage of the development of RILs, two parental strains are crossed (combined) to form a uniformly heterozygous F1 generation. F1 is internalized (or self-fertilized) to form an F2 generation; most individuals in F2 will contain recombinant chromosomes resulting from crosses between the two most purely parental chromosomes present in each F1 plant. Parental alleles are said to be segregating in the F2 generation, since it is a matter of luck just which of the three combinations of parental alleles will occur in a given F2 plant. Numerous individuals of the F2 se-gregação generation, then, serve as the bases of the corresponding RILs. Each subsequent generation of a given RIL is formed through self-fertilization in the previous generation and with a single seed descending. In this way, each RIL, after several generations, will contain two identical copies of each chromosome, with most of them being recombinant. Each individual RIL will contain a different mix of recombinant and parental chromosomes, with a unique set of recombination breakpoint sites throughout the genome. Taken as a group, the set of RILs forms a segregating QTL mapping population which can be regenerated in a stable manner year after year via a single descending seed.
[0054] [0054] As used here, genotypic designations are as follows: AABB - FAD2-1A homozygous wild type and FAD2-1B homozygous wild type; aaBB - FAD2-1A homozygous mutant (mFAD2-1A) and FAD2-1B homozygous wild type; AAbb - FAD2-1A homozygous wild type and FAD2-1B homozygous mutant (mFAD2-1B); aabb - homozygous mFAD2-1A and homozygous mFAD2-1B.
[0055] [0055] As used here, the soybean plant strains designated "Jake" and "Williams 82" (W82) are conventional soybean varieties that have wild-type levels of oleic acid and wild-type alleles of FAD2-1A and FAD2 -1B.
[0056] [0056] As used here, a Plant Introductions (PI) strain or plant introducing strain is a soybean strain that is admitted to be pure for several generations, so that your offspring stably inherits all the genes it contains. Plant introduction lines can be local breeds, cultivars, varieties, field collections of locally adapted lines, selections from any of these lines or advanced breeding lines that were endogamous and had stabilized genomes. The National Plant Germplasm System maintains a collection of strains of Glycine max referred to as Plant Introductions.
[0057] [0057] As used here, a maturity group is a division of groups of varieties based on the zones in which they are adapted, primarily according to the length of day or latitude conventional in the industry. They consist of very long-day varieties (Groups 000, 00, 0) and extend to very short-day varieties (Groups VII, VIII, IX and X).
[0058] [0058] A "fatty acid" is a carboxylic acid that generally has a long, unbranched aliphatic carbon chain. The designations (18: 2), (18: 1), (18: 3), etc. refer to the number of carbon atoms in the fatty acid chain and the number of double bonds in it, respectively. For example, oleic acid (18: 1) contains 18 carbon atoms and a double bond. Examples of fatty acids include: omega-3 fatty acids, such as: alpha-linolenic acid (CH3 (CH2CH = CH) 3 (CH2) 7COOH) omega-6 fatty acids, such as: linoleic acid (CH3 (CH2) 4CH = CHCH2CH = CH (CH2) 7COOH) omega-9 fatty acids, such as: oleic acid (CH3 (CH2) 7CH = CH (CH2) 7COOH) and saturated fatty acids, such as: palmitic acid (CH3 (CH2) 14COOH) stearic acid (CH3 (CH2) 8COOH).
[0059] [0059] An isolated nucleic acid, as used here, means a nucleic acid that is free of at least some of the contaminants associated with the nucleic acid or polypeptide that occur in a natural environment and that has a sequence that can encode a gene.
[0060] [0060] An isolated nucleic acid can be further defined, among other things, as a fragment or part of the nucleic acid, such as a short sequence of bases from the nucleic acid of at least a claimed length or a nucleic acid that encodes a truncated form, a modified form or an isoform of the protein or polypeptide encoded by the nucleic acid. An isolated nucleic acid can include DNA from which introns are removed. An isolated nucleic acid may be under the control of an exogenous promoter.
[0061] [0061] As used here, a mutation can be one or more nucleotide deletions, insertions or substitutions in the sequence of a polynucleotide. A mutation can be one or more of a “missense” mutation, meaningless, due to frame deviation, insertion or deletion.
[0062] [0062] As used here, a "missense" mutation is a point mutation in which a single nucleotide is exchanged in a gene sequence, resulting in an amino acid change in the corresponding amino acid. A "missense" mutation can result in reduced activity of the protein encoded by the gene or can result in a non-functional protein.
[0063] [0063] As used here, a nonsense mutation is a mutation in a DNA sequence that results in a premature terminal codon or a nonsense codon in the transcribed mRNA and can result in a truncated protein product. Nonsense mutations can result in reduced activity of the protein encoded by the gene or can result in a non-functional protein.
[0064] [0064] As used here, a frame shift mutation is a genetic mutation in a polynucleotide sequence caused by insertion or deletion of a series of nucleotides that is not divisible by three. Due to the triple nature of codon gene expression, the insertion or deletion can disrupt the reading frame or the codon cluster, resulting in a translated protein product different from the original gene without mutation. Mutations in the reading frame may result in reduced activity of the protein encoded by the gene or may result in a non-functional protein.
[0065] [0065] As used here, a deletion results in the loss of any number of nucleotides, for example, from a single base to an entire gene and adjacent polynucleotide sequences. A deletion mutation can result in reduced activity of the protein encoded by the gene, or it can result in a non-functional protein.
[0066] [0066] As used here, an insertion results in the addition of any number of nucleotides, for example, from a single base to thousands of bases. An insertion mutation can result in reduced activity of the protein encoded by the gene, or it can result in a non-functional protein.
[0067] [0067] As used here, a loss of function by mutation is a mutation that renders a protein unable to perform its biological function.
[0068] [0068] Mutations in isolated polynucleic acids can be done by methods known in the art such as, but without limitation, site-directed mutagenesis.
[0069] [0069] Mutations can be induced by X-rays, gamma rays or rapid neutron irradiation and treatment with chemical mutagenic agents, such as alkylating agents methyl methanesulfonate (EMS) or N-nitrous-N-methylurea NMU). In addition, natural genetic variation can result from mutations that arise from random DNA polymerase errors that occur during DNA replication of a plant's genome. Natural genetic variation in plants can also result from activation of DNA repair mechanisms after exposure to natural sources of ionizing or non-ionizing radiation.
[0070] [0070] Soy plants can be crossed using any natural or mechanical techniques. Natural pollination occurs in soybeans through self-fertilization or natural cross-pollination which is typically aided by pollinating organisms. In both natural and artificial crossing, flowering and flowering time are an important consideration. Soy is a short-day plant, but there is considerable genetic variation in sensitivity to the photoperiod. The critical day length for flowering ranges from about 13 h for genotypes adapted to tropical latitudes to 24 h for photoperiod-insensitive genotypes grown at higher latitudes. Soy seems to be insensitive to the length of the day for 9 days after emergence. Photoperiods shorter than the critical day length are required for 7 to 26 days to complete floral induction.
[0071] [0071] Soy flowers are typically self-pollinated the day the corolla opens. The stigma is receptive to pollen about 1 day before anthesis and remains receptive for 2 days after anthesis if the flower petals are not removed. Filaments of nine stamens are fused and the closest to the pattern is released. The stamens form a ring below the stigma until about 1 day before anthesis, then their filaments begin to elongate quickly and raise the anthers around the stigma. The anthers are half open on the day before, pollen grains fall on the stigma and, within 10 hours, the pollen tubes reach the ovary and fertilization is completed. Au-topolinization occurs naturally in soybean plants with any type of flower manipulation. For the crossing of two soybean plants, it is usually preferable, although not mandatory, to use artificial hybridization. In artificial hybridization, the flower used as a female at an intersection is manually pollinated before the pollen matures from the flower, thus avoiding self-fertilization or, alternatively, the male parts of the flower are crushed using a method known in technical. Techniques for emasculating the male parts of a soybean flower include, for example, physically removing the male parts, using a genetic factor that confers male sterility and applying a chemical gametocide to the male parts.
[0072] [0072] With or without emasculation of the female flower, manual pollination can be performed by removing the stamens and pistils with forceps from a flower of the male parent and gently brushing the anthers against the stigma of the female flower. Access to the stamens can be achieved by removing the frontal sepal and keel petals or by piercing the keel with closed forceps and letting it open to push the petals away. Brushing the anthers on the stigma causes them to break and the highest percentage of successful crosses is obtained when pollen is clearly visible on the stigma. Pollination can be verified by touching the anthers before brushing the stigma. It may be necessary to use several male flowers to obtain suitable pollen when conditions are unfavorable or the same male flower can be used to pollinate several flowers with good pollen.
[0073] [0073] The plants of the present invention can be used in whole or in part. Preferred plant parts include reproductive or storage parts. The term "plant parts" as used herein includes, without limitation, seed, endosperm, egg, pollen, roots, tubers, stems, leaves, stems, fruits, berries, nuts, barks, fruits, seeds and flowers. In one embodiment of the present invention, the plant part is a seed.
[0074] [0074] In one aspect, an isolated polynucleotide may comprise the nucleotide sequence of mFAD2-1B PI 283327 (SEQ ID NO: 1) or a fragment thereof. Alternatively, a polynucleotide may have substantial sequence similarity to SEQ ID NO: 1, for example, with at least 80%, 90%, 95%, 98% or 99% sequence identity to the sequence of SEQ ID NO: 1 In another aspect, a polynucleotide may have substantial sequence similarity to the nucleotide sequence of mFAD2-1B PI 567189A (SEQ ID NO: 3), for example, with at least 70%, 80%, 90%, 95%, 98% or 99% sequence identity to the sequence of SEQ ID NO: 3.
[0075] [0075] The expression of a protein is, in general, regulated by a non-coding region of a gene called a promoter. When a promoter controls the transcription of a gene, it can also be said that the expression of the gene (or the encoded protein) is triggered by the promoter. When a promoter is placed close to a coding sequence, so that the transcription of the coding sequence is under the control of the promoter, it can be said that the coding sequence is operably linked to the promoter. A promoter that is not normally associated with a gene is called a heterologous promoter.
[0076] [0076] In one embodiment, expression of the delta-12 desaturase protein encoded by SEQ ID NO: 1, SEQ ID NO: 3 or SEQ ID NO: 7, or the expression of a mutant delta-12 desaturase protein encoded by a sequence of polynucleotide characterized by the deletion of a FAD2-1A gene having a sequence as shown in SEQ ID NO: 5, alone or in combination, can function as a "dominant negative" protein mutation. Dominant negative mutations or antimorphic mutations occur when the gene product adversely affects the normal wild-type gene product within the same cell. This usually occurs if the product can still interact with the same elements as the wild type product, but it blocks some aspects of its function. Such proteins can be competitive inhibitors of the normal functions of the protein.
[0077] [0077] The peptides encoded by SEQ ID NO: 1, SEQ ID NO: 3, and SEQ ID NO: 7 of the present description or the peptide encoded by the nucleotide sequence characterized by the deletion of a FAD2-1A gene having a sequence as shown in SEQ ID NO: 5 of the present description can be prepared by chemical synthesis known to those skilled in the art. Peptides can also be produced using an expression vector having a nucleotide sequence that encodes the peptide (s) of choice. The nucleotide sequence can be operably linked to a promoter, enhancer, terminator or other appropriate sequences capable of regulating the expression of the encoded peptide. The nucleotide sequence can also be operably linked to other functional sequences. In one aspect, such a functional sequence can be a sequence that encodes a purification marker to facilitate expression and purification of the peptides. In another aspect, such a functional sequence can encode an accessory peptide that gives central peptides several properties that are beneficial for the therapeutic functionality of the central peptide, for example, by increasing the stability of the central peptide or facilitating the distribution of the central peptide to its tissue. or therapeutic target organ in the body.
[0078] [0078] The terms "protein", "polypeptide", "peptide" and "enzyme" can be used interchangeably in the present description, all of which refer to polymers of amino acids. In addition to the peptides explicitly described here, certain "conservative" substitutions can be made on these peptides without substantially altering the functionality of the peptides.
[0079] [0079] As generally understood in the art, amino acid residues conserved between orthologous proteins are the result of evolutionary pressure to maintain the biological function and / or the folding of the protein. A conserved amino acid position between sets of orthologous genes can be involved in many aspects of structure and function. Invariant positions or those that show conservation of certain properties of residues (for example, charge, hydrophobicity, etc.) are less likely to tolerate mutations than those where the protein family allows mutations in a wide variety of amino acids. Conservation of positional amino acid sequences based on sequence deposits in databases, for example, is useful in determining amino acid substitutions that can have a deleterious effect on protein folding and / or biological function.
[0080] [0080] Computerized algorithmic sequence alignment programs can be used to predict whether an amino acid substitution affects protein function based on sequence homology and physical properties of amino acids. Prediction methods for amino acid substitution such as, but not limited to, SIFT, PolyPhen, SNPs3D, PANTHER PSEC, PMUT and TopoSNP, can be used to predict the effect of an amino acid substitution on protein function. Such predictive methods can be used to determine amino acid substitutions that can result in a loss of function or reduced activity of the FAD2-1A and / or FAD2-1B genes.
[0081] [0081] Conservative amino acid substitutions are, in general, defined as the replacement of one or more amino acids by a different amino acid or amino acids that preserves the structural and functional properties of proteins.
[0082] [0082] "Non-conservative" substitutions of one amino acid for another are substitutions of amino acids having different structural and / or chemical properties and are, in general, based on differences in polarity, charge, hydrophobicity, hydrophilicity and / or amphipathic nature of waste involved. Substitute amino acids can include naturally occurring amino acids, as well as amino acids that are not normally present in proteins that exist in nature.
[0083] [0083] The following examples illustrate the present invention. These examples are provided for illustrative purposes only and are not intended to be limiting. Chemicals and other ingredients are presented as typical components or reagents and various modifications can be derived in view of the foregoing description within the scope of the invention. EXAMPLE 1 ISOLATION AND CHARACTERIZATION OF SOYBEAN PLANT LINES WITH HIGH OLEIC ACID CONTENT
[0084] [0084] About 40 soybean lines with high oleic acid content were selected. Three breeding strains, including a patented M23 strain (U.S. Patent No. 7,326,547), have been described as having different genes that affect oleic acid concentration. M23 has an oleic acid content of approximately 40% -50% of its total fatty acid profile. As described below, fatty acid profiles are represented as a percentage of the total fatty acid content of the seed. M23 has a single recessive gene, designated as ol, for the highest oleic acid content (Takagi, Y. & Rahman, S.M. Inheritance of high oleic acid content in the seed oil) of soybean mutant M23. Theoretical Applied Genetics 92, 179-182 (1996)). A recent study revealed that l in M23 is the result of a deletion at the FAD2-1A locus (Sandhu et al., 2007). The other two strains were plant introductions (PI) with a high oleic acid content based on fatty acid data from the Germplasm Resources Information Network (GRIN). GRIN showed that the strains PI 283327 and PI 567189A each contained an oleic acid content of about 41% and 38%, respectively. However, in field tests at the University of Missouri-Delta Center Por-tageville, MO in six environments between 2005-2007, strains PI 283327 and PI 567189A had, on average, about 30% oleic acid where, in one Check cultivar commonly grown by producers had, on average, an oleic acid content of around 22%. These two PIs were later found to have mutations in the FAD2-1B locus, which resulted in the highest oleic acid content in the seed. Selection and Intersections
[0085] [0085] The endogenous recombinant strain (RIL) of 1 population (RIL F6 of Jake x PI 283327), 2 (RIL F2: 6 and F2: 7 of M23 x PI283327) and 3 (RIL F2: 5 and F2: 7 of M23 x PI 567189 D) were created at the same time. Three crosses were made in the summer of 2005 at the Delta Research Center at Portageville, MO, including Jake x PI 283327, PI 283327 x M23 and M23 x PI 567189A. PI 283327 and PI 567189A are two strains with a high oleic acid content with the maturity group V and IV, respectively (GRIN USDA), while Jake is a conventional high yield soybean in group V that contains a typical oleic acid content. (Shannon, JG et al. Registration of 'Jake' Soybean. Journal of Plant Registration 129-30 (2007)). M23 was selected for high oleic acid content after mutagenesis of the cultivar Bay (Takagi, Y. & Rahman, S.M. Inheritance of high oleic acid content in the seed oil) of soybean mutant M23. Theoretical Applied Genetics 92, 179-182 (1996). In 2005 and early 2006, F1 seeds were advanced to the F2 generation in Costa Rica. Each RIL was grown on a single F2 plant, except for population 1, which was also advanced in Costa Rica from 2006 to 2007 for F5 seeds. In 2007, a volume of five seeds from each RIL in each population was analyzed to obtain the fatty acid profile for the location in Costa Rica. Population 1 was grown in Portageville, MO to produce F7 seeds. Population 2 was grown in Portageville, MO to produce F6 seeds, and then soybean RILs with more than 60% oleic acid were advanced to the F7 generation. In population 3, only F5 RILs that produced more than 60% oleic acid were selected to generate F7 seeds in Portageville, MO in subsequent generations.
[0086] [0086] In the paragraph immediately above, the nomenclature F2: 6 means F6 derived from F2, meaning that the last common ancestor of the lineages was in F1. F2 plants started from a single seed down to the F6 generation. A representative sample of population 2 consisting of at least 2500 seeds was placed in a deposit in accordance with the terms of the Budapest Treaty for conditional release of seeds under the grant of an issued patent. This deposit is called PTA 11061.
[0087] [0087] In 2008, populations 1 and 2 were grown in Porta-geville, MO to produce the seeds analyzed for fatty acids in Figures 8 and 9. The data in FIG. 10 were from F5 seeds of the population 3 produced in Costa Rica. In addition, five strains with the highest oleic acid content of populations 2 and 3 were grown in Columbia, MO in 2009. In 2009, population 4 (17D x (PI 283327 x Jake)) was grown in Columbia, MO to produce the seeds analyzed for fatty acids in Figure 5. Similarly, 4-11 strains from each of the four homozygous FAD2-1A and FAD2-1B gene combinations from population 4 were grown in Columbia MO and selected strains from population 4 were grown in Portageville, MO in 2009.
[0088] [0088] Population 5 started in the summer of 2008 in Portageville, MO. The soybean strain KB07-1 # 123 was crossed with the soybean strain # 93 of the population 2. Genotyping of the soybean strain # 93 (> 80% oleic acid) was performed to contain the Δ FAD2-1A alleles of M23 and the P137R alleles of FAD2-1B derived from PI 283327. KB07-1 # 123 is a soybean line with the pedigree [W82 x (M23 x 10-73)]. This soybean strain was selected because it contains three mutant alleles that affect the fatty acid profile, including Δ M23 FAD2-1A alleles and mutant FAD3A and FAD3C alleles from the soybean strain 10-73 (Dierking, E. & Bilyeu, K. New sources of soybean seed meal and oil composition traits identified through TILLING. BMC Plant Biology 9, 89 (2009); Bilyeu, K., Palavalli, L., Sleper, D. & Beuselinck, P. Mutations in soybean microsomal omega-3 fatty acid desaturase genes reduce linolenic acid concentration in soybean seeds. Crop Science 45, 1830-1836 (2005). F1 seed genotyping was performed to confirm heterozygosity and then advanced to obtain F2 seeds in the summer of 2009 at Bradford Research and Extension Center, Columbia MO.
[0089] [0089] The selection of desirable traits can occur in any segregating generation (F2 and above). The selection pressure can be exerted on a growing population, the population in an environment where the desired trait is maximally expressed and the individuals or lines that have the trait can be identified. For example, selection for disease resistance may occur when plants or strains are grown in natural environments or with artificially induced disease and the producer selects only individuals who have little or no disease and are therefore presumed to be resistant.
[0090] [0090] Double mutant soybean plant strains, that is, mFAD2-1A and mFAD2-1B, may vary in terms of oleic acid concentration depending on the environment, however, the oleic acid content (usually an oleic acid content of up to about 80% -85%) is consistently higher than the wild type or mutant soybean plant strains mFADIA or mFAD2-1B.
[0091] [0091] Crossing of M23 and PI 283327 or PI 567189A resulted in an offspring with levels of oleic acid (about 85% and about 65%, respectively) that are significantly higher than either parent (about 20% - 50%). This is probably the result of the combination of mutant alleles of FAD2-1A derived from M23 and FAD2-1B derived from PI 283327 or PI 567189A.
[0092] [0092] When the combination of a FAD2-1A gene other than the 17D strain (17D has a mutant FAD2-1A S117N allele and 35% oleic acid, developed by means of Williams 82 seed mutagenesis) x PI 283327, strains with 80 % oleic acid has also been identified. Regardless of the source of the two genes, the inheritance of FAD2-1A and FAD2-1B genes with mutation in a single genotype resulted in at least twice the oleic acid concentration as either parent. Genetic Characterization of FAD2-1A and FAD2-1B Mutations
[0093] [0093] For the initial characterization of the FAD2-1A and FAD2-1B alleles of multiple germplasm strains, the FAD2-1A and FAD2-1B genes were amplified by PCR and sequenced. Genomic DNA was isolated from approximately 30 mg of crushed seeds using the DNeasy Plant Mini Kit (Qiagen, Inc., Valencia, CA). 5 to 50 ng of genomic DNA were used by PCR reaction. PCR was performed using Ex Taq according to the manufacturer's recommendation (Takara, Otsu, Shiga, Japan) on a PTC-200 thermocycler (MJ Re-search / Bio-Rad, Hercules, CA). The sense primer for FAD2-1A was 5'-ACTGCATCGAATAATACAAGCC-3 '(SEQ ID NO: 13) and the antisense primer was 5'-TGATATTGTCCCGTGCAGC-3' (SEQ ID NO: 14). The sense primer for FAD2-1B was 5'-CCCGCTGTCCCTTTTAAACT-3 '(SEQ ID NO: 15) and the antisense primer was 5'-TTACATTATAGCCATGGATCGCTAC-3' (SEQ ID NO: 16). The PCR conditions were: 95 ° C for 5 minutes, followed by 34 cycles of 95 ° C for 30 seconds, 60 ° C for 30 seconds, 72 ° C for 1 minute and 30 seconds. The PCR products were analyzed for size by passing on Flashgel for 5 minutes. The PCR products were then isolated with the Qiaprep Spin Miniprep kit (Qiagen, Inc.) and sequenced at the University of Missouri DNA Core Facility using the sense and antisense primers for FAD2-1A and FAD2-1B. The sequence data were compared with the Williams 82 reference sequence of the "wild type" (W 82) for the FAD2-1A and FAD2-1B genes. Comparative sequence analysis of all strains tested is illustrated in Table 2.
[0094] [0094] As shown in Table 2, "S>F" represents a substitution of the amino acid serine for phenylalanine. "M>V" represents a substitution of the amino acid methionine for valine. "P>R" represents a substitution of the amino acid proline for arginine. "I>T" represents a substitution of the amino acid isoleucine for threonine. Table 2. Variants in DNA sequences of FAD2-1B mutants
[0095] [0095] DNA sequence analysis revealed that PI 283327 contains a substitution of nucleotide C for G in nucleotide 410 in the coding sequence (mRNA) of FAD2-1B, resulting in a "missense" mutation by substitution of proline amino acid for arginine in the amino acid 137 (P137R). In contrast, PI 567189A was found to have a T to C nitrogen substitution at nucleotide 428 in the FAD2-1B coding sequence, resulting in a "missense" mutation from isoleucine to threonine at amino acid 143 (I143T). Other polymorphisms of a single amino acid were present in the allele, but did not alter the amino acid sequence (silent mutations), contained "missense" mutations replacing analog amino acids (methionine to valine at amino acid position 126 (M126V), for example) or contained mutations “Missense” in non-conserved regions of the protein (serine for phenylalanine at amino acid position 86 (S86F), for example).
[0096] [0096] Previously, investigation of the S86F mutation in a different germplasm flare with this mutation was not associated with an increase in oleic acid content, even in the presence of the deleted M23 FAD2-1A allele. The P137R mutation in FAD2-1B is in a very conserved position in the protein, while the I143T mutation is in a less conserved position (FIG. 1B). After these discoveries, PI 210179 was found to contain an FAD2-1B allele identical to PI 283327. PI 578451 was found to contain an FAD2-1B allele identical to PI 567189A. Other germplasm accessions containing FAD2-1A alleles and variant FAD2-1B alleles have also been discovered through sequencing.
[0097] [0097] FIG. 1B shows the relative frequency of amino acid substitutions between amino acids 135-150 of the FAD2 gene sequences present in the National Center for Biotechnology Information sequence database. The results of Weblogo were determined by the conservation of amino acids from fatty acid desaturase enzymes aligned as part of the BLINK resource in the NCBI using the GI number 197111724. The positions of the amino acids within the protein are listed on the X axis. The total height for each column of amino acids indicates the conservation of sequence in this position, while the height of the one-letter amino acid symbols in the column indicates the relative frequency of each amino acid in this position Crooks GE, Hon G, Chandonia JM, Brenner SE WebLogo: A sequence logo generator , Genome Research, 14: 1188-1190, (2004)]. The white and black arrows indicate the positions P137R and I143T with mutation in PI 283327 and PI 567189A, respectively.
[0098] [0098] FIG. 1A is reproduced from Dierking and Bilyeu 2009, BMC Plant Biology 9: 89, to show the results in Weblogo of the relative frequency of amino acid substitutions / conservation of amino acids between amino acids 104-123 of the FAD2 gene. Amino acid positions within the protein are listed on the X axis. The total height for each column of amino acids indicates the conservation of the sequence in this position, while the height of the amino acid symbols in a letter in the column indicates the relative frequency of each amino acid in this position. . The arrow indicates the S117N position with FAD2-1A mutation in line 17D.
[0099] [0099] Much work has been done with the M23 FAD2-1A gene, but initial results with the 17D line suggest that soybean lines with 80% oleic acid can be produced with a FAD2-1A mutation source in combination with a mutation in FAD2-1B (described below). The High Oleic Acid Phenotype is stable in Plants Grown in Alternative Environments
[0100] [00100] Some of the soybean strains with a high oleic acid content developed in the present study demonstrated stability for the high oleic acid trait when grown in different environments (Table 3). Of the three environments, Costa Rica typically has the warmest temperatures during seed development, followed by the Portageville, MO environment; the Columbia, MO environment is the coldest of the three environments during seed development. Differences in oleic acid content between environments when the FAD2-1B alleles of P137R were present were minimal. Soy strains with AABB genotype from populations 2 and 4 produced an oleic acid content of more than 80% in the environments of Costa Rica and Portageville, MO and the oleic acid level was, on average, 2-4% lower when grown in the Columbia, MO environment. It is notable that the variation in the phenotype was limited in all environments. In contrast, population 3 AABB soybean strains containing the FAD2-1B alleles of I143T had a lower and more variable oleic acid content in colder environments and failed to produce a high oleic acid phenotype in Columbia environments, MO or Porta-geville, MO. Table 3. Oleic acid content and seed generation from soybean strains with different combinations of FAD2-1A and FAD2-1B mutants produced in three environments
[0101] [00101] Table 4 illustrates that the high oleic acid phenotype is stable in several growing environments, including Portageville, MO, Columbia, MO, Stoneville, MS and Knoxville, TN. Soy plants that have inherited the AABB genotype have an oleic acid content ranging from 72.3-83.2%. Table 4
[0102] [00102] The strains S08-14692, S08-14709, S08-14705, S08-14700, S08-S08-14702 and 14717 are soybean strains selected from a crossing of the M23 x PI283327 strains that inherited the mutant FAD2-1A alleles ( aa) of M23 and the FAD2-1B P137R (BB) alleles of PI 283327 and are of the aabb genotype. Anand and 5002T strains are soybean strains that are wild type for the FAD2-1A (AA) and FAD2-1B (BB) alleles and have the AABB genotype. The N98-4445A strain is a soybean strain that contains a high oleic acid content and carries at least six genes (QTLs) that condition the high oleic acid phenotype. Determination of Fatty Acid Content
[0103] [00103] The fatty acid profiles as a percentage of total oil for each genotype within each environment were determined using Gas Chromatography (GC), as described by Oliva et al. (2006). In most cases, five individual seeds of different strains and crosses were selected at random for fatty acid analysis. The fatty acid profiles, as illustrated in FIG. 2, however, used between 5 or 10 seeds for measurement. Each sample of 5 or 10 seeds was placed in a paper envelope and then crushed by hand with a hammer. The oil was extracted by placing the crushed seeds in 5 ml of chloroform: hexane: methanol (8: 5: 2, v / v / v) overnight. Derivatization was carried out by transferring 100 μl of extract to flasks and adding 75 μL of methylation reagent (0.25 M sodium methoxide in methanol: petroleum ether: ethyl ether, 1: 5: 2 v / v / v). Hexane was added to take samples to approximately 1 ml. An Agilent 6890 capillary gas chromatograph (Palo Alto, CA) equipped with a flame ionization detector (275 ° C) was used with an AT-Silar capillary column (Alltech Associates, Deerfield, IL). Mixtures of standard fatty acids (Reference Mixture of Animal and Vegetable Oil 6, AOACS) were used as reference standards for calibration.
[0104] [00104] As shown in Figures 2-4, "A" denotes a "wild type" FAD2-1A allele or not without mutation, as brought by the reference line W 82. "a" denotes an FAD2-1A allele with mutation (mFAD2-1A), as brought by the M23 strain. "B" denotes a FAD2-1B allele of the "wild type" or without mutation. "b" indicates a mutated FAD2-1B allele (mFAD2-1B), as brought by the strains PI 283327 and PI 567189A. Thus, "AA" denotes a homozygous genotype of FAD2-1A, "aa" denotes a homozygous genotype of mFAD2-1A, "BB" denotes a homozygous genotype of FAD2-1B, "bb" denotes a homozygous genotype of mFAD2-1B, Aa denotes a heterozygous genotype of FAD2-1A / mFAD2-1A and BB denotes a heterozygous genotype of mFAD2-1B / FAD2-1B.
[0105] [00105] FIG. 2 is a bar graph showing the relative fatty acid content of 16: 0, 18: 0, 18: 1, 18: 2 and 18: 3 fatty acid components in several allelic variants of the F7 offspring derived from endogenous strains M23 x PI 283327 recombinants (RILs). As can be seen in FIG. 2, the homozygous offspring for FAD2-1A and FAD2-1B of the wild type (AABB) had levels of oleic acid consistent with what is normally found in nature, that is, about 20%. The levels of the corresponding by-product of desaturation of oleic acid, linoleic acid, were about 55%. Mutations in FAD2-1B only (AAbb) showed only a very small increase in oleic acid content, which ranges from about 25% to about 30%. Notably, the offspring with the mFAD2-1A and mFAD2-1B (aabb) alleles had oleic acid levels of about 80%, with the corresponding linoleic acid levels below 5%.
[0106] [00106] As shown in FIG. 3, the oleic acid content was further characterized and compared with the parental strains M23 and PI 283327. Consistent with the results in FIG. 2, seeds with the wild type alleles (AABB) had levels of oleic acid of about 20%. Seeds with aaBB or AAbb genotypes had oleic acid levels of about 40% or about 25%, respectively. As shown in FIG. 2, while mutations in FAD2-1B only (AAbb) showed only a minimal increase in oleic acid content, double mutant seeds with the mFAD2-1A and mFAD2-1B (aabb) alleles had about 80% oleic acid levels. M23 and PI 283327 seeds had oleic acid levels around 42% and 25%, respectively.
[0107] [00107] Similar to the M23 strain, 17D is a soybean strain that has a mutation in the FAD2-1A gene. As shown in FIG. 4, F2 seeds (produced in Costa Rica in early 2009) homozygous for this mutation showed a small increase in oleic acid levels, from about 20% to about 25%. When line 17D was crossed with a line derived from PI 283327, F2 seeds containing homozygous genes of mFAD2-1A and mFAD2-1B (aabb) had an oleic acid content of about 80%. FIG. 4 also shows that several heterozygous genotypes had varying levels of oleic acid, illustrating that stratification of oleic acid levels can be achieved by varying combinations of FAD2-1A and FAD2-1B alleles. For example, the heterozygous inheritance of 17D mFAD2-1A (Aa) and the homozygous inheritance of mFAD2-1B (bb), resulted in seeds with oleic acid levels of about 45%.
[0108] [00108] Initial investigation of the FAD2-1 genotype and fatty acid phenotype in F2 seeds of Population 4 (crossing FAD2-1A S117N x FAD2-1B P137) demonstrated the epistatic nature of the mutant alleles working together and the results revealed that only and homozygous combinations of both FAD2-1A and FAD2-1B mutants were able to produce the high oleic acid phenotype. Of the 200 F2 seeds that underwent phenotyping, there were 12 individual F2 seeds with the FAD2-1 aabb genotype and they had an oleic acid content of about 81%, ranging from 75.2% to 83.9% oleic acid (FIG. 4). The highest oleic acid phenotype in the set was 48.8% and this seed had the genotype FAD2-1 Aabb. For a model with two recessive genes, one sixteenth of the individuals must inherit the phenotype; The recovery of 12 individuals with the phenotype of high oleic acid content satisfies this expectation by the Chi-square test at the probability level of 0.05.
[0109] [00109] Individuals with a single wild-type version of FAD2-1A or FAD2-1B in combination with three FAD2-1 allele mutants (Aabb or aaBb) contained approximately 40% oleic acid. No seed from any of the other FAD2-1 genotypes contained levels of oleic acid above 49% in the seed oil. Individuals with two or more wild-type FAD2-1 alleles contained an oleic acid content within a range of 18-47% in the seed oil.
[0110] [00110] The need for a combination of homozygous mutants FAD2-1A and FAD2-1B for the high oleic acid phenotype was confirmed in an independent analysis of the FAD2-1 genotype and fatty acid phenotypes in the field produced F2 seeds that contained Δ homozygous FAD2-1A alleles, but which were segregating to P137R FAD2-1B alleles (Population 5). While the average level of oleic acid in seeds with the aabb genotype was 82.5%, aaBb seeds had, on average, 55.4%; aaBB seeds had, on average, 43.4% oleic acid in the seed oil. The presence of a single wild-type version of the FAD2-1B allele also prevented a high oleic acid content in the seed oil, although the magnitude of the difference was greater than for Population 4 F2 seeds.
[0111] [00111] Table 5 shows the relative oleic acid content for 14 lines of soybean plants derived from M23 x PI 283327 between 2006-2007 and 2007-2008. As designated in Table 3, "TA" represents the maturity date in days after 1 August, that is, an MT of 68 indicates that the lineage matured on 8 October. Each of the 14 F6 strains was homozygous recessive for mFAD21A and mFAD2-1B. In addition, each of the 14 strains produced a distinct F2 plant and are endogenous F2: 6 recombinant strains. These results were derived from seeds grown in Costa Rica. Samples from 2006-2007 were from the F5 generation, while samples derived from 2007-2008 were from the F6 generation. The concentrations of oleic acid were, in general, close to or above 80%, ranging from about 79% to about 86%. Table 5. Oleic acid content as a percentage of total fatty acid for 14 strains of soybean plants derived from M23 x PI283327 grown in Costa Rica
[0112] [00112] Table 6 shows the fatty acid profiles of 14 lines of soybean plants derived from M23 x PI 283327 grown in 2008. Each of the 14 F6 lines were homozygous recessive for mFAD2-1A and mFAD2-1B. In addition, each of the 14 strains produced a distinct F2 plant and is a recombinant F2: 6 strain. Soya beans from the 14 strains were grown in Portageville, Missouri. The concentrations of oleic acid were, in general, close to or above 80%, ranging from about 79% to about 85%. Table 6. Fatty acid profile for 14 F7 lines of soybean plants derived from M23 x PI 283327 grown in Portageville, Missouri
[0113] [00113] Table 7 shows the fatty acid profiles from analyzes in 2008 for 12 F2 lines of soybean plants derived from 17D x S08-14788 (Jake x PI 283327). Oleic acid levels ranged from about 75% to about 84%. Table 7. Fatty acid profile for 12 F2 soybean lines derived from 17D x S08-14788 (Jake x PI283327)
[0114] [00114] The seeds (grown in Portageville, Missouri in 2008) derived from a cross between M23 and PI 567189A (M23 x PI 567189A) were also analyzed to determine the relative amounts of oleic acid. FIG. 5 represents the genotype and phenotype analysis of plants that have inherited a wild type (AA) version or deletion version (aa) of the FAD2-1A gene and a wild type (BB) or mutant I143T (bb) allele (bb) of FAD2- 1B from PI 567189A, which differs from the mFAD2-1B allele present in PI 283327 (described above). As shown in FIG. 5, the mFAD2-1B allele of PI 567189A was "weaker" than the mFAD2-1B allele of PI 283327. While soybean plants that inherited homozygous alleles of PI 283327 and M23 had levels of oleic acid consistently around 80 %, soybean plants that inherited the homozygous FAD2-1A and FAD2-1B alleles mutants of PI 567189A and M23 had an oleic acid content of around 65%.
[0115] [00115] The seeds derived from the crossing between Jake and PI 283327 (Jake x PI 283327) were also analyzed to determine their fatty acid profile. FIG. 6 represents the genotype and phenotype analysis for plants that have inherited a wild type (AA) version of the FAD2-1A gene and a wild type (BB) or P137R (bb) mutant of FAD2-1B from PI 283327 , which differs from the mFAD2-1B allele present in PI 567189A (described above). As shown in FIG. 6, the mFAD2-1B allele of PI 283327 in the wild-type Jake base (AAbb) had modest effects on oleic acid levels, while seeds that inherited the AABB genotypes had approximately 20% oleic acid levels and seeds that inherited the AAbb genotypes had only a slight increase in oleic acid levels of approximately 28%.
[0116] [00116] Taken together, these data indicate that plants that have inherited loss of function or reduced activity mutations in the FAD2-1A gene and in the FAD2-1B gene produced seeds with high levels of oleic acid, ranging from about 75% to about 85%.
[0117] [00117] The total fatty acid profiles of the seeds of these contrasting classes of FAD2 genotypes produced from populations 2, 3 and 4 of this study revealed additional changes in the content of palmitic acid, linoleic acid and linolenic acid (Table 6). As expected for a great decrease in the activity of the FAD2 enzyme expressed in the seed that results in an accumulation of oleic acid, the reaction products of FAD2, linoleic acid and linolenic acid, were drastically reduced in the homozygous mutant strains for FAD2- 1A and FAD2-1B with high oleic acid content when any of the mutations in FAD2-1A was present together with the P137R or I143T alleles of FAD2-1B.
[0118] [00118] Table 8 shows fatty acid profiles for different homozygous FAD2-1 genotypes in four segregating populations developed by crossing soybean strains containing different sources of mutant FAD2-1A alleles with different sources of mutant FAD2-1B alleles. Table 8. Fatty acid profiles of different genotypes
[0119] [00119] When evaluating the proportion of oleic, linoleic and linolenic acid present in the oil extracted from the mature seeds, the relative activities of desaturase FAD2 and FAD3 of the developing seeds were determined for the contrasting homozygous genotypes FAD2-1 of each population. The AABB genotypes for FAD2-1 contained FAD2 desaturase activities (the sum of the final levels of linoleic acid and linolenic acid divided by the sum of the final levels of oleic, linoleic and linolenic acid, expressed as a percentage) of 76%, 76% and 74% for Population 2, Population 3 and Population 4, respectively. The aabb genotypes for FAD2-1 contained 7%, 10% and 14% FAD2 desaturase activities for Population 2, Population 3 and Population 4, respectively. It is also noted that the accumulation of linolenic acid follows a different pattern for the mutant strains aabb for FAD2-1 compared to the AABB strains of FAD2-1, with increased FAD3 desaturase activity (final linolenic acid content divided by the sum of the final levels linoleic acid and linolenic acid) for FAD2-1 mutant strains.
[0120] [00120] Although no significant differences were observed in the levels of stearic acid in the contrasting FAD2-1 genotypes, the aabb mutant strains consistently produced lower levels of palmitic acid than the strains with the AABB genotype. The most dramatic change was for Population 2. In this case, the content of palmitic acid was 7.9% for mutant strains aabb compared to 12.3% for strains AABB.
[0121] [00121] Due to the concern that an improvement in the fatty acid profile could have a negative impact on the protein and total oil profiles in the seeds, we also evaluated the levels of protein and oil for F2: 3 seeds produced in the field from of Population 4. There were no significant differences in protein or oil content between the different homozygous genotypes of FAD2 or with these strains compared with the parental Williams 82 or 17D strains. The parental strain donor of the P137R allele of FAD2-1B had a small decrease in the average oil content and the highest average protein content of all the strains examined. Genotyping of Soy Strains with High Oleic Acid Content with FAD2-1B Allele of PI 283327 and PI 567189A and FAD2-1B Allele of Wild Type
[0122] [00122] Genotyping assays were designed to distinguish FAD2-1B alleles from PI 283327 and PI 567189A from wild type alleles. The genotyping assays work by means of real-time asymmetric gene-specific PCR amplification of the genomic DNA of the FAD2-1B region around single nucleotide polymorphisms (Single Nucleotide Polymorphisms - SNPs) c410g and t428c, in the presence of SimpleProbe fluorescently labeled (Roche Applied Sciences). After amplification, the PCR products are subjected to a melting curve analysis, which tracks the SimpleProbe's dissociation kinetics from the target DNA. SimpleProbe has a characteristic melting profile for homozygous, wild-type and heterozygous mutant alleles.
[0123] [00123] SimpleProbe, GmFAD2-1B, was designed to detect wild-type, heterozygous and homozygous mutant alleles. Simple-Probe GmFAD2-1B consists of 5'-SPC (chemistry with single probe) -AGTCCCTTATTTCTCATGGAAAATAAG C-Phosphate-3 '(SEQ ID NO: 17). The mutation from C to G and the mutation from T to C are indicated by the underline. Genotyping reactions were performed with an asymmetric mixture of 5: 2 primers (5'-ACTGCATCGAATAATACAAGCC-3 '(SEQ ID NO: 18) in a final concentration of 2 pM and 5'-TGATATTGTCCCGTCCAGC-3' (SEQ ID NO: 19) at a final concentration of 5 pM). The reactions were carried out in 20 μl containing model, primers, final concentration of SimpleProbe of 0.2 μM and 0.2X and Taq Titanium polymerase (BD Biosciences, Palo Alto, CA). Genotyping reactions were performed using a Lightcycler 480 II real-time PCR instrument (Roche) using the following PCR parameters: 95 ° C for 5 minutes, followed by 40 cycles of 95 ° C for 20 seconds, 60 ° C for 20 seconds, 72 ° C for 20 seconds and then a melting curve from 55 ° C to 70 ° C. When the DNA of PI 283327 and PI 567189A is amplified with the specific primers for the gene and used in melting curve analysis with Simple-Probe, an erroneous combination between SimpleProbe and amplicon results in dissociation kinetics changed. Each genotype produced a characteristic melting profile, as measured by the Tm of the first negative derivative of the disappearance of the fluorescent signal. PI 283327 and all soybean strains with similar FAD2-1B genotype have a characteristic peak of 56.7 ° C, whereas PI 567189A provided a characteristic peak at 60.2 ° C. M23 and Jake (wild type for FAD2-1B) peak at 62.5 ° C. Genotype of the heterozygous individual showed two peaks at 56.7 ° C or 60.2 ° C and 62.5 ° C.
[0124] [00124] Genotyping for three Jake x PI 283327, M23 x PI 283327, M23 x PI 567189A populations was performed with the Sim-pleProbe assay, as described. FIG. 7 graphically represents a melting curve analysis with peaks corresponding to the homozygous mutant (bb), wild type (BB) and heterozygotic (BB) alleles of the FAD2-1B and mFAD2-1B genes. Effect of Temperature on Oleic Acid Content
[0125] [00125] Although there is evidence of influence of temperature on the oleic acid content in soybean seeds, two of our three genotypes with a high oleic acid content have proven to be able to produce a high oleic acid content and to be stable in three environments. In addition, there was no reduction in the oil and protein content in the soybean lines with high oleic acid content evaluated. Soybean lines with the combination of Δ alleles I143T of FAD2-1A and FAD2-1B of population 3 were unable to produce the phenotype of high oleic acid content when grown in non-tropical environments. One possible explanation is that the mutation in the FAD2-1B allele of PI 567189 encodes at least one nominal enzyme function. This explanation is supported by the fact that the I143T substitution is a less conserved amino acid of the FAD2 enzyme than the P137R substitution. In addition, soybean strains with a high oleic acid content showed a reduction of a maximum of 4% when they were grown in the coldest environment, with a small variation in the oleic acid content. It will be necessary to test the performance of these soybean strains with a high oleic acid content in soybean growth sites in North America in northern latitudes. The mutant FAD2-1A and FAD2-1B alleles will have to be combined in soybean strains with the appropriate maturity for these experiments to be carried out. However, based on the stability of the trait that we have observed so far, it is likely that any reduction in the oleic acid content due to the environment is minimal because very little activity of the enzyme FAD2 remains in the developing seeds in the strains with FAD2-1A FAD2-1B mutants. An additional factor is that the end-use market has not matured enough to define the exact oleic acid content desired for the different uses of the oil. Another issue that should be addressed is whether the trait will affect yield or other agronomic traits. Transgenic soybean lines with FAD2-1 genes being silenced have been reported to show no effect on yield or abnormal physiological characteristics.
[0126] [00126] The methods and strains described above work to produce conventional soybean varieties containing an enhanced trace of nutritional oil profile with high oleic acid content in the oil. The annual demand for oleic acid is approximately four million tons of oil with oleic acid and continues to grow. This figure translates to an annual production of two million acres of soybean grains with a high oleic acid content to meet current demand. The availability of soybeans with traces of an intensified oil profile can influence the market and increase demand, particularly if the capacity for internal biofuels increases.
[0127] [00127] As described above, transgenic technology is not necessary, thus eliminating the need for the expensive and time-consuming regulation process. The perfect soy molecular and germplasm markers developed are an efficient way to quickly integrate these desirable traits into additional commercial soybean strains.
[0128] [00128] The industry did not have access to elite non-GM soy varieties with the trace of high oleic acid content. It is likely that soy oil with a high oleic acid content will be a substitute in the food industry for food formulations that previously used partially hydrogenated vegetable oil. Currently, soybean oil with a low content of linolenic acid can fill part of the demand for alternatives to partially hydrogenated vegetable oil that contains trans fats. Acid soy oil with a high oleic acid content adds value by improving the functionality of soy oil in many products, such as improving the cold flow of biodiesel; best lubricants to withstand high temperatures and wide use in food, pharmaceutical and other products. EXAMPLE 2 GENERATION OF SOYBEAN SEEDS WITH HIGH OILIC ACID CONTENT USING STANDARD IMPROVEMENT METHODS
[0129] [00129] Soybean plant varieties are analyzed for mutations that result in loss of reduced biological function or activity of the FAD2-1A or FAD2-1B genes, as described above. Soybean plant lines that exhibit decreased activity in FAD2-1A or FAD2-1B, as measured by the phenotype of oleic acid content, are crossed (mFAD2-1A x mFAD2-1B) to generate offspring that carry a mutation in FAD2-1A and a mutation in FAD2-1B. These mutations are stably inherited and work in synergy to produce seeds with high levels of oleic acid. Fatty acid compositions are analyzed from seeds of soybean strains derived from parental crossing using gas chromatography. Seeds from the processed plants exhibit high levels of oleic acid, between about 65% to about 85%. EXAMPLE 3 SELECTION OF SOY LINES WITH HIGH OILIC ACID CONTENT WITH ADDITIONAL DESIRABLE TRACES
[0130] [00130] In certain modalities, it may be desirable to select soybean plants with seeds having a high oleic acid content, as well as additional desirable traits with various phenotypes of agronomic interest. Examples of additional desirable traits may be, but are not limited to, disease resistance, pest resistance, pesticide resistance, accelerated growth rate, high seed yield, ability to grow in diverse environments, etc.
[0131] [00131] A soybean plant with mutations of loss of function or reduced activity in FAD2-1A and FAD2-1B is crossed with a soybean plant with one or more desirable traits. The offspring of the cross are analyzed for the presence of desirable genotypic and phenotypic traits from FAD2-1A / FAD2-1B double mutants and soybean plants with additional desirable traits. EXAMPLE 4 GENERATION OF TRANSGENIC PLANTS FOR NEGATIVE DOMINANT FAD2
[0132] [00132] A soybean nucleotide sequence with at least 80%, 90%, 95%, 98% or 99% sequence identity to the sequence of SEQ ID NO: 1, SEQ ID NO: 3 or SEQ ID NO: 7, or with a sequence encoding mutant M23 characterized by the deletion of the FAD2-1A gene having a sequence as shown in SEQ ID NO: 5 is cloned into an expression vector. The resulting expression constructs are used for processing soy using biological methods described below.
[0133] [00133] The expression vector may have a promoter that functions to express a dominant negative form of mFAD2-1B at levels greater than those observed when expressed with the endogenous or wild-type promoter.
[0134] [00134] Linear DNA fragments that contain the expression constructs for the negative dominant expression of mFAD2-1B desaturase genes are stably introduced into soybeans (Asgrow variety A3244 or A4922A32) using the particle bombardment method of McCabe et al . (1988), Bio / Technology, 6: 923-926 or by co-culture with the ABI strain of Agrobacterium tumefaci-ens (Martinell, U.S. Patent No. 6,384,310). Processed soybean plants are identified by means of genotyping assays described above.
[0135] [00135] Fatty acid compositions are analyzed from seeds of soybean lines transformed with the negative dominant expression constructs using gas chromatography. EXAMPLE 5 GENERATION OF SOYBEAN SEEDS WITH HIGH OILIC ACID CONTENT
[0136] [00136] Soybean plant seeds are analyzed for spontaneous mutations that result in phenotypes with a high oleic acid content, as described above. Soybean plant strains that exhibit decreased activity in FAD2-1A or FAD2-1A, as measured by the oleic acid content phenotype, are crossed (ie, mFAD2-1A x mFAD2-1B) to generate an offspring that brings about a mutation FAD2-1A and a FAD2-1B mutation. These mutations are stably inherited and work in synergy to produce seeds with high levels of oleic acid. Fatty acid compositions are analyzed from seeds of soybean strains derived from parental crossing using gas chromatography. Seeds from processed plants exhibit high levels of oleic acid (more than 80%).
[0137] [00137] Seeds with the double mutation silencing FAD2-1A and FAD2-1B were deposited at the American Type Culture Collection in Rockville, Maryland, as a patent filing under the terms and conditions of the Budapest Treaty in a deposit designated PTA -122103.
[0138] [00138] The PI603452 strain has an alternative FAD2-1A mutation according to (SEQ ID NO: 20) due to the fact that there is a deletion of a single adenine base at position 543/544. This was crossed with the P137R allele of FAD2-1B of PI 283327 (SEQ ID NO: 1). The data in Table 9 compare the fatty acid profiles of different genotypes under identical growth conditions. The two strains in bold (aabbP1603_744 and aabbP1603_760) represent this new combination of FAD2-1A alleles of PI 603452 containing single-base deletion and the P137R allele of FAD2-1B of PI 283327. This confirms the mechanism of action by demonstrating that yet another non-functional mutant FAD2-1A allele produces more than 80% oleic acid when crossed with a non-functional mutant FAD2-1B allele. Table 9. Fatty acid profiles of different genotypes
[0139] [00139] The description of the specific modalities reveals general concepts that others can modify and / or adapt to various applications or uses that do not deviate from the general concepts. Therefore, such adaptations and modifications must and are intended to be included in the meaning and range of equivalents of the described modalities. It should be understood that the phraseology or terminology used here is for the purpose of description and not limitation. Certain terms with uppercase or lowercase letters, either singular or plural, may be used interchangeably in the present description.
[0140] [00140] All references mentioned in this application are incorporated by reference to the same extent as if reproduced here in full.

权利要求:
Claims (20)
[0001]
Method of production of a soybean plant with seeds with an oleic acid content between 65% and 85%, characterized by the fact that it comprises: crossing a first soybean plant with a mutant FAD2-1A allele with a second soybean plant with a mutant FAD2-1B allele, and obtaining a progeny soybean plant having both the FAD2-1A mutant allele and the FAD2-1B mutant allele, thus producing a seeded soybean plant with an oleic acid content between 65% to 85%, wherein said mutant FAD2-1A allele comprises a deletion of a single adenine base (A) at position 543 or 544 of SEQ ID NO: 9, and said mutant FAD2-1B allele comprises a polynucleotide sequence of SEQ ID NO : 11, or degenerate nucleotide sequences thereof that encode the same amino acid sequence of SEQ ID NO: 12, wherein the codon encoding the amino acid at position 137 of SEQ ID NO: 12 is selected from the group consisting of CGT, CGC , CGA and CGG, or where the codon encoding the amino acid at position 143 of SEQ ID NO: 12 is selected from the group consisting of ACT, ACC, ACA and ACG.
[0002]
Method according to claim 1, characterized in that said first soy plant is produced by a recombinant DNA process.
[0003]
Method according to claim 1, characterized in that said second soy plant is produced by a recombinant DNA process.
[0004]
Method according to claim 1, characterized by the fact that at least one of the first and second soybean plants is identified and obtained by screening a population of soybean plants for the presence of the said mutant FAD2-1A allele and / or the said mutant FAD2-1B allele.
[0005]
Method according to claim 4, characterized by the fact that both the first and second soybean plants are identified and obtained by screening a population of soybean plants for the presence of said mutant FAD2-1A allele and / or said allele FAD2-1B mutant.
[0006]
Method for making soybean oil with an oleic acid content of at least 65%, characterized by the fact that it comprises the steps of: crossing a first soybean plant having a mutant FAD2-1A allele with a second soybean plant having a mutant FAD2-1B allele, wherein said mutant FAD2-1A allele comprises a deletion of a single adenine base (A) at the 543 or 544 of SEQ ID NO: 9, and said mutant FAD2-1B allele comprises a polynucleotide sequence of SEQ ID NO: 11, or degenerate nucleotide sequences thereof that encode the same amino acid sequence of SEQ ID NO: 12 , where the codon encoding the amino acid at position 137 of SEQ ID NO: 12 is selected from the group consisting of CGT, CGC, CGA and CGG, or where the codon encoding the amino acid at position 143 of SEQ ID NO: 12 is selected from the group consisting of ACT, ACC, ACA and ACG; obtaining a progeny soybean plant having both the FAD2-1A mutant allele and the mutant FAD2-1B allele to develop a variety showing a yield of at least 65% oleic acid in seed oil; cultivate the variety to develop soybean with seed oil with a yield of at least 65% oleic acid in the seed oil; and process soy to make seed oil.
[0007]
Method according to claim 1, characterized in that said first soybean plant having the mutant FAD2-1A allele comprises the polynucleotide sequence of SEQ ID NO: 20.
[0008]
Method according to claim 1, characterized in that said second soybean plant having the mutant FAD2-1B allele comprises the polynucleotide sequence of SEQ ID NO: 1 or SEQ ID NO: 3.
[0009]
Method according to claim 1, characterized in that said progeny soy plant having both the mutant FAD2-1A allele and the mutant FAD2-1B allele comprises SEQ ID NO: 20 and SEQ ID NO: 1.
[0010]
Method according to claim 1, characterized in that said progeny soy plant having both the mutant FAD2-1A allele and the mutant FAD2-1B allele comprises SEQ ID NO: 20 and SEQ ID NO: 3.
[0011]
Method of production of a soybean plant with seeds with an oleic acid content between 65% and 85%, characterized by the fact that it comprises: (1) crossing a first soybean plant comprising a first polynucleotide sequence encoding a FAD2-1A mutant, said polynucleotide sequence comprising a single adenine base (A) deletion at position 543 or 544 of SEQ ID NO: 9, wherein said mutant FAD2-1A is not functional or has reduced activity compared to wild-type FAD2-1A, with a second soybean plant comprising a second nucleotide sequence of SEQ ID NO: 11, or sequences degenerate nucleotides of the same that encode the same amino acid sequence of SEQ ID NO: 12, where the codon encoding the amino acid at position 137 of SEQ ID NO: 12 is selected from the group consisting of CGT, CGC, CGA and CGG, or where the codon encoding the amino acid at position 143 of SEQ ID NO: 12 is selected from the group consisting of ACT, ACC, ACA and ACG, wherein said FAD2-1B mutant is non-functional or has reduced activity compared to the jungle type FAD2-1B gem; and (2) selecting a progeny soy plant that comprises said first and second polynucleotide sequences, thus producing a soybean plant with seeds with an oleic acid content between 65% and 85%.
[0012]
Method according to claim 11, characterized in that said first polynucleotide sequence comprises SEQ ID NO: 20.
[0013]
Method according to claim 11, characterized in that said second polynucleotide sequence encodes a non-functional FAD2-1B mutant or a reduced activity FAD2-1B mutant compared to wild-type FAD2-1B that includes at least a mutation comprising an amino acid at position 137 of SEQ ID NO: 12.
[0014]
Method according to claim 13, characterized in that said polar amino acid is selected from the group consisting of arginine, glycine, serine, threonine, cysteine, asparagine, tyrosine, glutamine, lysine and histidine.
[0015]
Method according to claim 11, characterized in that said second polynucleotide sequence encodes a non-functional mutant FAD2-1B or a mutant FAD2-1B with reduced activity compared to wild-type FAD2-1B that includes at least least one mutation comprising a polar amino acid protein at position 143 of SEQ ID NO: 12.
[0016]
Method according to claim 15, characterized in that said polar amino acid is selected from the group consisting of arginine, glycine, serine, threonine, cysteine, asparagine, tyrosine, glutamine, lysine and histidine.
[0017]
Method according to claim 11, characterized in that said first polynucleotide sequence comprises SEQ ID NO: 20 and wherein said second polynucleotide sequence encodes a non-functional mutant FAD2-1B or a mutant FAD2-1B with reduced activity compared to wild-type FAD2-1B, which includes at least one mutation comprising a polar amino acid at position 137 of SEQ ID NO: 12.
[0018]
Method according to claim 17, characterized in that said polar amino acid is selected from the group consisting of arginine, glycine, serine, threonine, cysteine, asparagine, tyrosine, glutamine, lysine and histidine.
[0019]
Method according to claim 11, characterized in that said first polynucleotide sequence comprises SEQ ID NO: 20 and wherein said second polynucleotide sequence encodes a non-functional mutant FAD2-1B or an active mutant FAD2-1B reduced compared to wild-type FAD2-1B which includes at least one mutation comprising a polar amino acid at position 143 of SEQ ID NO: 12.
[0020]
Method according to claim 19, characterized in that said polar amino acid is selected from the group consisting of arginine, glycine, serine, threonine, cysteine, asparagine, tyrosine, glutamine, lysine and histidine.

类似技术:

---

公开号 | 公开日 | 专利标题

---

US10774337B2|2020-09-15|Method to develop high oleic acid soybeans using conventional soybean breeding techniques

---

US10329576B2|2019-06-25|Method to develop high oleic acid soybeans using conventional soybean breeding techniques

---

US10570406B2|2020-02-25|Soybean seed and oil compositions and methods of making same

---

DK2167667T3|2015-07-27|Brassica plant comprising the mutant fatty acyl-ACP thioesterase alleles

---

Hatzopoulos et al.2002|Breeding, molecular markers and molecular biology of the olive tree

---

Lee et al.2018|EMS-induced mutation of an endoplasmic reticulum oleate desaturase gene | results in elevated oleic acid content in rapeseed |

---

WO2016089677A2|2016-06-09|Novel qtl of brassica plant correlated to fatty acid profile

---

Rahman et al.2013|Development of low-linolenic acid Brassica oleracea lines through seed mutagenesis and molecular characterization of mutants

---

Nath2008|Increasing erucic acid content in the seed oil of rapeseed | by combining selection for natural variation and transgenic approaches

---

Gaskin2016|Combinations of Mutations Within Pathway Provide for Combined Trait Phenotypes in Lines with SACPD Mutations in Soybean

---

Thambugala2013|Analysis of genetic diversity and expression of genes involved in fatty acid composition in flax | and comparative genomic analysis of their loci

---

Sauer2005|Molecular approaches in breeding for low linolenic acid in soybean oil

同族专利:

---

公开号 | 公开日

---

US20200017870A1|2020-01-16|

---

ZA201305902B|2014-04-30|

---

BR112013017972A2|2017-06-20|

---

CA2824671A1|2012-08-09|

---

CN103687479A|2014-03-26|

---

US10774337B2|2020-09-15|

---

CA2824671C|2018-01-09|

---

CN103687479B|2016-08-31|

---

US20160068853A1|2016-03-10|

---

AR085892A1|2013-11-06|

---

US10087454B2|2018-10-02|

---

EP2663177A4|2014-05-14|

---

CN106234206A|2016-12-21|

---

US9198365B2|2015-12-01|

---

UY33868A|2012-04-30|

---

WO2012106105A1|2012-08-09|

---

US20120192306A1|2012-07-26|

---

EP2663177A1|2013-11-20|

引用文献:

---

公开号 | 申请日 | 公开日 | 申请人 | 专利标题

---

---

US20100293669A2|1999-05-06|2010-11-18|Jingdong Liu|Nucleic Acid Molecules and Other Molecules Associated with Plants and Uses Thereof for Plant Improvement|

---

US7531718B2|1999-08-26|2009-05-12|Monsanto Technology, L.L.C.|Nucleic acid sequences and methods of use for the production of plants with modified polyunsaturated fatty acids|

---

US20060080750A1|2002-03-21|2006-04-13|Fillatti Joanne J|Nucleic acid constructs and methods for producing altered seed oil compositions|

---

JP2004000003A|2002-04-22|2004-01-08|Sagaken Chiiki Sangyo Shien Center|New soybean mutant and process for preparing soybean oil using this|

---

CN100339481C|2005-03-17|2007-09-26|东北师范大学|Method in increasing oleic acid content of soybean and peanut seed by applying gene silent technology|

---

CN105475117B|2006-03-10|2019-05-28|孟山都技术有限公司|The method of the composition and the generation seed of soya seeds and oil|

---

JP5665004B2|2009-06-22|2015-02-04|国立大学法人佐賀大学|Mutants that increase oleic acid content in soybean oil and its causative genes|

---

CN105557503A|2009-07-08|2016-05-11|密苏里大学管委会|Method To Develop High Oleic Acid Soybeans Using Conventional Soybean Breeding Techniques|

---

AR085892A1|2011-01-14|2013-11-06|Univ Missouri|METHOD FOR DEVELOPING SOYA WITH A HIGH CONTENT OF OIL ACID USING CONVENTIONAL DEVELOPMENT TECHNIQUES|CN105557503A|2009-07-08|2016-05-11|密苏里大学管委会|Method To Develop High Oleic Acid Soybeans Using Conventional Soybean Breeding Techniques|

---

AR085892A1|2011-01-14|2013-11-06|Univ Missouri|METHOD FOR DEVELOPING SOYA WITH A HIGH CONTENT OF OIL ACID USING CONVENTIONAL DEVELOPMENT TECHNIQUES|

---

CN105120656A|2012-12-21|2015-12-02|塞尔克蒂斯股份有限公司|Potatoes with reduced cold-induced sweetening|

---

US10113162B2|2013-03-15|2018-10-30|Cellectis|Modifying soybean oil composition through targeted knockout of the FAD2-1A/1B genes|

---

BR112015022778A2|2013-03-15|2017-11-07|Cellectis|modified soybean oil composition by targeted silencing of the fad2-1a / 1b geneits method of production and use of a soybean plant, plant part, plant cell, or soybean seed with |

---

EP3158072B1|2014-06-20|2021-01-13|Cellectis|Potatoes with reduced granule-bound starch synthase|

---

CN104962632A|2015-06-30|2015-10-07|黑龙江富航农业科技有限公司|Primers for detecting B1 type mutation of soybean fatty acid dehydrogenase synthesis gene and application thereof|

---

CN104988227A|2015-06-30|2015-10-21|黑龙江富航农业科技有限公司|Primer combination used for detecting A3 mutation of soya fatty acid dehydrogenase synthetic genes and application|

---

US10837024B2|2015-09-17|2020-11-17|Cellectis|Modifying messenger RNA stability in plant transformations|

---

WO2017134601A1|2016-02-02|2017-08-10|Cellectis|Modifying soybean oil composition through targeted knockout of the fad3a/b/c genes|

---

US20170283820A1|2016-04-04|2017-10-05|The United States Of America, As Represented By The Secretary Of Agriculture|High oleic acid soybean seeds|

---

BR112019018200A2|2017-03-03|2020-07-28|Pioneer Hi-Bred International, Inc.|method for measuring the amount of a sucrosyl-oligosaccharide, method for measuring stachyose, method for processing genetically modified soybean seeds|

---

CN108949807B|2018-06-04|2021-10-12|西北农林科技大学|Method for improving yield of plant polyunsaturated fatty acid|

---

CN109006459A|2018-07-24|2018-12-18|重庆市农业科学院|A kind of soybean breeder method of protein content stable type|

---

CN110361509B|2019-07-18|2020-07-07|中国科学院植物研究所|Method for obtaining oil product quality evaluation model of peony seeds|

法律状态:
2018-04-03| B06F| Objections, documents and/or translations needed after an examination request according [chapter 6.6 patent gazette]|

---

2019-06-11| B06T| Formal requirements before examination [chapter 6.20 patent gazette]|

---

2020-03-24| B07A| Application suspended after technical examination (opinion) [chapter 7.1 patent gazette]|

---

2020-12-08| B09A| Decision: intention to grant [chapter 9.1 patent gazette]|

---

2021-02-17| B16A| Patent or certificate of addition of invention granted [chapter 16.1 patent gazette]|Free format text: PRAZO DE VALIDADE: 20 (VINTE) ANOS CONTADOS A PARTIR DE 17/01/2012, OBSERVADAS AS CONDICOES LEGAIS. |

优先权:

---

申请号 | 申请日 | 专利标题

---

US201161433120P| true| 2011-01-14|2011-01-14|

---

US61/433,120|2011-01-14|

---

PCT/US2012/021535|WO2012106105A1|2011-01-14|2012-01-17|Method to develop high oleic acid soybeans using conventional soybean breeding techniques|

---